BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB034E08SP1|AL429916
(890 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1506 456 e-128
3x_Contig1302 408 e-114
>3x_Contig1506
Length = 7652
Score = 456 bits (230), Expect = e-128
Identities = 237/238 (99%), Gaps = 1/238 (0%)
Strand = Plus / Minus
Query: 654 ctgacgcgatccaaaaatataatagtttaaaaagaatctgaatggggttgtttcttgcct 713
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7652 ctgacgcgatccaaaaatataatagtttaaaaagaatctgaatggggttgtttcttgcct 7593
Query: 714 cagaggcctgtgtattctattccaaaaaaaaaaaatcagtcgttttataaattctggagt 773
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7592 cagaggcctgtgtattctattccaaaaaaaaaaaatcagtcgttttataaattctggagt 7533
Query: 774 tggcccaattacaggcatacattacaatatagaataaagagcagtttcaataaatccatt 833
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7532 tggcccaattacaggcatacattacaatatagaataaagagcagtttcaataaatccatt 7473
Query: 834 agtcaatcagttaaaaacttttgg-ttcactttcagtcttctcttcgagttttgtatt 890
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 7472 agtcaatcagttaaaaacttttggtttcactttcagtcttctcttcgagttttgtatt 7415
>3x_Contig1302
Length = 5215
Score = 408 bits (206), Expect = e-114
Identities = 206/206 (100%)
Strand = Plus / Plus
Query: 1 ataccctttatacttatatagtatcacaaaaacatgaattagctcaagatatcaattgat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5010 ataccctttatacttatatagtatcacaaaaacatgaattagctcaagatatcaattgat 5069
Query: 61 ttcttcgtttaaattagaatgacagaaagtactttaatgtcccgcagccgcgatcaggta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5070 ttcttcgtttaaattagaatgacagaaagtactttaatgtcccgcagccgcgatcaggta 5129
Query: 121 cagatatgtattgggactgtatcgtgaacccgttgactatttctgtgttaactctgtgta 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5130 cagatatgtattgggactgtatcgtgaacccgttgactatttctgtgttaactctgtgta 5189
Query: 181 cgcttgtaaccttttaagttgaaggg 206
||||||||||||||||||||||||||
Sbjct: 5190 cgcttgtaaccttttaagttgaaggg 5215
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 13,807
Number of Sequences: 1807
Number of extensions: 13807
Number of successful extensions: 107
Number of sequences better than 1.0e-20: 2
length of query: 890
length of database: 10,358,551
effective HSP length: 16
effective length of query: 874
effective length of database: 10,329,639
effective search space: 9028104486
effective search space used: 9028104486
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)